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K-Means clustering is a classical and effective unsupervised learning method attributed to its simplicity and efficiency. However, it faces notable challenges, including sensitivity to random initial centroid selection, a limited ability to discover the intrinsic manifold structures within nonlinear datasets, and difficulty in achieving balanced clustering in practical scenarios. To overcome these weaknesses, we introduce a novel framework for K-Means that leverages manifold learning. This approach eliminates the need for centroid calculation and utilizes a cluster indicator matrix to align the manifold structures, thereby enhancing clustering accuracy. Beyond the traditional Euclidean distance, our model incorporates Gaussian kernel distance, K-nearest neighbor distance, and low-pass filtering distance to effectively manage data that is not linearly separable. Furthermore, we introduce a balanced regularizer to achieve balanced clustering results. The detailed experimental results demonstrate the efficacy of our proposed methodology.